Wolbachia+Targets

PURPOSE:
To see if there are any proteins with Xray crystal structures in the PDB similar to these //Wolbachia// targets. If so, this will enable us to do Virtual Screening against this endosymbiont of the //Brugia malayi// (helminth).

INSTRUCTIONS:
Go to **WOLTR_JoshViewGDocs** spreadsheet on Google Docs, sign in as **vdsclass** > == Find the entries associated with your name (should have 17 entries). Use **Ctrl + F** to search for your name, if necessary Copy the #Accession number for each Go to NCBI Gene database website Enter the Gen #Accession number ON the right hand side (rhs) find the 'Protein' link Click on the entry with the matching #Accession number (usually the first one) On the rhs
 * @https://docs.google.com/spreadsheet/ccc?key=0AvGl3lMyhDsodHg2NElsLXNXeDFQcGVTWDJnWTc1VkE
 * Alternatively, go to our VDSclass Google Docs and open the file directly.
 * Analyze this Sequence >> **Run BLAST**
 * Should see your Accession number in the top panel
 * Under **Database** option, Choose **Protein Data Bank (pdb)**
 * Run **BLAST**
 * Record Results to spreadsheet for the top match
 * Date, Your Name, Accession of PDB BLASTmatch, Description, Max Score, Total Score, Query Coverage, E value, Max ident